yvfS [2019-09-05 12:12:46]

similar to [SW|ABC transporter] (transmembrane subunit)

locus: BSU_34080

pI: 9.76

mw: 27.78 kDa

protein length: 245 aa

gene length: 738 bp

function: unknown

product: [SW|ABC transporter] (transmembrane subunit)

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,497,614 3,498,351

The protein

Protein family

• [SW|ABC-2 integral membrane protein family] (according to UniProt)

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|B6BBB827CB475423FC9A781058141B7D05C4D284|yvfR]-[gene|72E387D5D44FA20D6EEFF1B39B6C9F322F966FC5|yvfS]
  description: [Pubmed|26647299]

Biological materials

Mutant

• MGNA-A482 (yvfS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/482 NBRP B. subtilis, Japan]
• BKE34080 ([gene|72E387D5D44FA20D6EEFF1B39B6C9F322F966FC5|yvfS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCTTTGCTTTTGCAGCACGT, downstream forward: _UP4_AGAAAACAAGAAGCGGTGTA
• BKK34080 ([gene|72E387D5D44FA20D6EEFF1B39B6C9F322F966FC5|yvfS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCTTTGCTTTTGCAGCACGT, downstream forward: _UP4_AGAAAACAAGAAGCGGTGTA

References

• 10092453,26647299,28461449